francois-a / fastqtl

Enhanced version of the FastQTL QTL mapper

http://fastqtl.sourceforge.net

francois-a/fastqtl Issues

Output
Updated 8 months ago
--permute parameter only report 1 eQTL result
Closed 8 months ago
how to convert vcf4.2 to vcf4.1?
Updated 8 months ago
The model in fastQTL.
Updated 10 months ago
cannot find FastQTL in sourceforge.net
Updated a year ago1
Python exception error with running example data
Updated a year ago
Permutation conducted across family members
Updated a year ago
genotype match with phenotype
Updated a year ago1
how fastqtl deal with ./. genotype
Updated 2 years ago2
Bad BED format leading to fastQTL issues
Closed 2 years ago1
The software description page is missing
Closed 2 years ago1
Deriving beta-adjusted p-values from nominal p-value and shape parameters
Updated 2 years ago4
The run_FastQTL_threaded.py script produces different output files with the same input files for different chunks number
Closed 2 years ago1
Imputing missing phenotypes
Updated 2 years ago1
Issue in FastQTL output
Closed 3 years ago2
interaction term
Closed 3 years ago2
MAF could be the REF clarification
Closed 3 years ago2
fastQTL strand
Closed 4 years ago2
Full column names of fastqtl permutation result.
Closed 4 years ago3
Utilizing dosage input to encode a non-genetic 'genotype'
Closed 4 years ago1
An error occurred when I run the script run_fastqtl_threaded.py
Closed 5 years ago4
If the number of genotype samples is greater than the phenotype, will genotype samples be used to calculate MAF independently?
Closed 4 years ago5
fastQTL no longer normalizes the phenotypes
Closed 4 years ago8
Could not make: libRmath.a: No such file or directory
Closed 4 years ago2
issue in merge_chunk.py
Closed 5 years ago1
issue running fastqtl.static
Closed 5 years ago2
run_FastQTL_threaded.py script doen't work
Closed 6 years ago3
Error when trying to install FastQTL
Closed 6 years ago2