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François Aguet (francois-a)

francois-a

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Company:Illumina, Inc.

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François Aguet's repositories

fastqtl

Enhanced version of the FastQTL QTL mapper

Language:C++License:GPL-3.0Stargazers:54Issues:4Issues:29

llsmtools

Software for processing and analyzing lattice light sheet microscopy data.

Language:MATLABStargazers:8Issues:6Issues:1

rnaseqc

RNA-SeQC v1 — Please upgrade to v2: https://github.com/broadinstitute/rnaseqc

Language:JavaStargazers:8Issues:5Issues:3

rnaseq-utils

Utilities for RNA-seq analyses

Language:PythonLicense:BSD-3-ClauseStargazers:4Issues:2Issues:0

aFC

Calculates allelic Fold Change (aFC) using standard input files for fastQTL.

Language:PythonStargazers:1Issues:2Issues:0

steerable

Language:Jupyter NotebookLicense:MITStargazers:1Issues:2Issues:0

bedtools2

A powerful toolset for genome arithmetic.

Language:C++License:GPL-2.0Stargazers:0Issues:0Issues:0

DaPars2

Dynamics analysis of Alternative PolyAdenylation from RNA-seq

Language:PythonLicense:GPL-2.0Stargazers:0Issues:0Issues:0

eigenMT

An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants

Language:PythonStargazers:0Issues:2Issues:0

fiss

FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine

Language:PythonStargazers:0Issues:2Issues:0

leafcutter

Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard

Language:RLicense:Apache-2.0Stargazers:0Issues:1Issues:0

pandas-plink

PLINK reader for Python.

Language:PythonLicense:MITStargazers:0Issues:2Issues:0

pyCircos

python Circos

Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0