Beast code in Giters

fefasd's starred repositories

OrthoFinder

Accurate inference of orthologous gene groups made easy. "OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthologous gene group inference accuracy"

Language:PythonGPL-3.0500

fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Language:C++MIT100

vcf2phylip

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

Language:PythonGPL-3.0200

HSDFinder

a tool to predict highly similar duplicates (HSDs) in eukaryotes

Language:PythonMIT200

Roary

Rapid large-scale prokaryote pan genome analysis

Language:PerlNOASSERTION30900

MentaLiST

The MLST pipeline developed by the PathOGiST research group

Language:JuliaMIT3500

Repositorio para el taller de "Bioinformática: secuenciación masiva y genómica" realizado en la Universidad Católica (sede San Joaquín), Santiago, Chile. Dictado por el Dr. Eduardo Castro-Nallar, CBIB, Universidad Andres Bello. Mayo 2017