#Copasi2SedML Copasi2SedML contains a library and tools that allow to convert a COPASI file containing a time course task to SED-ML L1V1.
This work is based on the COPASI C# bindings and libSedML.
To use the library, simply add a reference to LibCopasi2SedML.dll to your project, and ensure that the remaining files in the package are next to the binaries (remembering to include the native counter part to the COPASI C# bindings in your PATH|LD_LIBRARY_PATH|DYLD_LIBRARY_PATH. From there things could not be simpler as you can see in the code to the command line converter:
var converter = new Copasi2SedMLConverter(inputFile);
converter.SaveTo(outputFile);
The command line converter expects two arguments, the COPASI input file, and the SED-ML output filename. If the output filename ends in .sedx (the format for the SED-ML archive) the archive will be produced, i.e: the model will be included together with the description.
CopasiSedMLExport.exe -f inputFile -o outputFile
This project is open source and freely available under the Simplified BSD license. Should that license not meet your needs, please contact me.
Copyright (c) 2013, Frank T. Bergmann
All rights reserved.
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- Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
- Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
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