Fawaz Dabbaghie's repositories
gfa_subgraphs
Extracts subgraphs or components from a graph in GFA format
msa_to_gfa
Small python program to turn MSA to GFA v1 with paths of original sequences
smith_waterman_cython
A test implementation of Smith Waterman algorithm with Cython
kmer-counter
Count kmers with a more efficient (faster) hash table
academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Language:JavaScriptMIT000
batch_effects_shiny_app
A Shiny app that installs epigenomic data from DeepBlue and allows the user to run batch effect analysis on it
Language:RMIT000
cobsi_index_download
Generating an information table and downloading files from the COBSI index
Language:PythonMIT000
dsb-meeting.github.io
Web site for dsb meetings
Language:HTMLMIT000
metadata_fixer
a semi-automated pipeline for fixing metadata related from experiments
Language:HTML000
PanPA-rtd
Read the docs for PanPA
Language:Python000
theupsetkmer
Create Upset diagrams from k-mer sets
Language:PythonMIT000
VAPiD
VAPiD: Viral Annotation and Identification Pipeline
Language:ShellMIT000