marschall-lab

marschall-lab

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panacus

Panacus is a tool for computing statistics for GFA-formatted pangenome graphs

Language:RustLicense:MITStargazers:67Issues:4Issues:22

GFAffix

GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.

Language:RustLicense:MITStargazers:33Issues:8Issues:13

gaftools

General purpose utility related to GAF files

Language:PythonLicense:MITStargazers:8Issues:2Issues:12

project-male-assembly

HGSVC SIG: targeted chromsome Y assembly

Language:Jupyter NotebookLicense:MITStargazers:5Issues:0Issues:0

hrfs

Analysis of the set of founder sequences under a homologous recombination model

Language:RustLicense:MITStargazers:4Issues:1Issues:0

panpa

PanPA is a tool for generating alignment of protein graphs

License:GPL-3.0Stargazers:1Issues:1Issues:0

marschall-lab.github.io

Group website of the Marschall Lab

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