eugenemel / maven_core

MAVEN: Core Libraries

MAVEN CORE: Set of Library for use in Metabolomic Analysis and Visualization Engine

Appveyor:

Travis:

Compile

git clone  [e-mail]:eugenemel/maven_core.git maven_core
cd maven_core
qmake -r
make -j4

Dependencies

Windows

1. Install the MSYS2 platform for Windows

2. From a mingw64 prompt, install 64-bit QT, zlib, and sqlite

   pacman -S --needed --noconfirm git
   pacman -S --needed --noconfirm make
   pacman -S --needed --noconfirm mingw-w64-x86_64-qt-creator
   pacman -S --needed --noconfirm zlib-devel
   pacman -S --needed --noconfirm mingw64/mingw-w64-x86_64-sqlite3
   

Note: There is a bug in MSYS2 packages that causes the following error:

Cloning into 'maven_core'...
warning: redirecting to https://github.com/eugenemel/maven_core/
remote: Counting objects: 694, done.
remote: Total 694 (delta 0), reused 0 (delta 0), pack-reused 694
Receiving objects: 100% (694/694), 1.53 MiB | 0 bytes/s, done.
Resolving deltas: 100% (153/153), done.
Checking out files: 100% (576/576), done.
': not a valid identifierline 88: export: `dashless

WORKAROUND

mv /mingw64/bin/envsubst.exe /mingw64/bin/envsubst.exe.orig
pacman -S gettext

OSX / MacOS

1. Install the Homebrew package management system

2. Install the qt5 package

   brew update
   brew install qt5
   

3. Setup the environment for the newly installed qt5

   export PATH="/usr/local/opt/qt/bin:$PATH"
   export LDFLAGS="-L/usr/local/opt/qt/lib"
   export CPPFLAGS="-I/usr/local/opt/qt/include"
   export PKG_CONFIG_PATH="/usr/local/opt/qt/lib/pkgconfig"
   

Linux (Ubuntu 16.04 LTS, Xenial)

1. Add the PPA to install QT 5.8

   sudo add-apt-repository ppa:beineri/opt-qt58-xenial
   sudo apt-get update
   

2. Install QT, opengl libraries, sqlite3, mysql, and libssl-dev

   sudo apt-get install qt58-meta-minimal \
                        mesa-common-dev \
                        libgl1-mesa-dev \
                        libsqlite3-dev \
                        libmysqlclient-dev \
                        libssl1.0.0 \
                        libssl-dev
   

Authors: Eugene Melamud Copyright 2010 Eugene Melamud / Princeton University Copyright 2016 Eugene Melamud / Calico Labs LLC.

This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.