Emir Turkes's repositories
website-eturkes-hugo
My personal website built using the Hugo static site generator and Wowchemy Academic theme
AD-exosome-characterisation
Analysis of exosomes in Alzheimer's Disease
bag3-pathway-analysis
Pathway analysis of the BAG3 protein
chen-2020-ST
Analysis of Spatial Transcriptomics data from Chen et al 2020
crowley-visium-EC-stim
Analysis of Visium data from DREADD stimulated mice generated by Gerard Crowley at the Hong Lab at UK DRI at UCL
djangocms-rawhtml
DjangoCMS Plugin that lets you insert raw HTML
docker-xelatex-awesome-cv
Docker Image used to compile Awesome CV
ic-papers-analysis
Data mining of Intellicage papers
FAN1KO-ipsc-snRNAseq
Analysis of snRNAseq data from FAN1 KO iPSC lines
iss-microglia
Repo for in-situ sequencing (ISS) analysis of microglia
KeepToText
Convert a Google Takeout zip file containing Google Keep notes to a directory of text files, suitable for import into systems such as Evernote
LCM-NFT-N1
Analysis of N of 1 LCM NFT Proteomics Data
napari-wsireg
Whole slide image registration through wsireg in napari.
quick-omics
Repo for quick exploratory analyses
R-docker-minimal
Docker image with a minimal configuration and packages
tau-vulnerability
Multiomics exploration of selective vulnerability to tauopathy
taub-beamer-template
A beamer template for the CUMC Taub Institute, adapted from http://www.rax.cl/other-stuff
transcriptomics-benchmarks
A benchmarking of the many tools in the transcriptomics ecosystem
website-eturkes
My personal website, adapted from Divio's django CMS
zetaview-endosome-analysis
Analysis of endosome size using ZetaVIEW