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Egor Dolzhenko (egor-dolzhenko)

egor-dolzhenko

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Company:@PacificBiosciences

Location:United States

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Egor Dolzhenko's starred repositories

variation-clusters

Language:Jupyter NotebookLicense:MITStargazers:2Issues:0Issues:0

colab-repeat-finder

A tool that finds perfect and nearly-perfect repeats

Language:PythonLicense:MITStargazers:2Issues:0Issues:0

HG002

A complete diploid human genome

Stargazers:83Issues:0Issues:0

trgt-denovo

De novo tandem repeat calling from PacBio HiFi data

Language:RustLicense:NOASSERTIONStargazers:7Issues:0Issues:0

find-outlier-expansions

Find repeat expansions that appear as outliers relative to the normal repeat variation

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:2Issues:0Issues:0

trgt-tutorial

A basic tutorial explaining how to run and interpret the output of TRGT / TRVZ

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:2Issues:0Issues:0

tr-solve

A tool to resolve the structure of tandem repeats

Language:Jupyter NotebookStargazers:2Issues:0Issues:0

nushell

A new type of shell

Language:RustLicense:MITStargazers:30750Issues:0Issues:0

trgt

Tandem repeat genotyping and visualization from PacBio HiFi data

Language:RustLicense:NOASSERTIONStargazers:93Issues:0Issues:0

pbfusion

Language:PythonStargazers:18Issues:0Issues:0

typst

A new markup-based typesetting system that is powerful and easy to learn.

Language:RustLicense:Apache-2.0Stargazers:29576Issues:0Issues:0

TRexs

TRGT Repeat expansion summary

Language:RLicense:BSD-3-Clause-ClearStargazers:10Issues:0Issues:0

speki

flashcard app in your terminal

Language:RustLicense:GPL-2.0Stargazers:489Issues:0Issues:0

rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Language:RustLicense:MITStargazers:1535Issues:0Issues:0

tauri

Build smaller, faster, and more secure desktop applications with a web frontend.

Language:RustLicense:Apache-2.0Stargazers:79135Issues:0Issues:0

cosmopolitan

build-once run-anywhere c library

Language:CLicense:ISCStargazers:15606Issues:0Issues:0

pyxirr

Rust-powered collection of financial functions.

Language:RustLicense:UnlicenseStargazers:156Issues:0Issues:0

REViewer

A tool for visualizing alignments of reads in regions containing tandem repeats

Language:C++License:GPL-3.0Stargazers:72Issues:0Issues:0

RepeatCatalogs

License:CC-BY-SA-4.0Stargazers:16Issues:0Issues:0

lwjgl3

LWJGL is a Java library that enables cross-platform access to popular native APIs useful in the development of graphics (OpenGL, Vulkan, bgfx), audio (OpenAL, Opus), parallel computing (OpenCL, CUDA) and XR (OpenVR, LibOVR, OpenXR) applications.

Language:JavaLicense:BSD-3-ClauseStargazers:4659Issues:0Issues:0

programming-math-science

This is a list of links to different freely available learning resources about computer programming, math, and science.

License:CC0-1.0Stargazers:1665Issues:0Issues:0

ehdn-to-eh

Language:PythonLicense:MITStargazers:2Issues:0Issues:0

Nuitka

Nuitka is a Python compiler written in Python. It's fully compatible with Python 2.6, 2.7, 3.4-3.12. You feed it your Python app, it does a lot of clever things, and spits out an executable or extension module.

Language:PythonLicense:Apache-2.0Stargazers:11166Issues:0Issues:0

texme

Self-rendering Markdown + LaTeX documents

Language:JavaScriptLicense:MITStargazers:2269Issues:0Issues:0

zellij

A terminal workspace with batteries included

Language:RustLicense:MITStargazers:19145Issues:0Issues:0

flipbook

A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.

Language:PythonLicense:MITStargazers:19Issues:0Issues:0

noodles

Bioinformatics I/O libraries in Rust

Language:RustLicense:MITStargazers:461Issues:0Issues:0

awesome-cto

A curated and opinionated list of resources for Chief Technology Officers, with the emphasis on startups

License:CC0-1.0Stargazers:25208Issues:0Issues:0

rustlings

:crab: Small exercises to get you used to reading and writing Rust code!

Language:RustLicense:MITStargazers:50725Issues:0Issues:0

ziglings

Learn the Zig programming language by fixing tiny broken programs.

License:MITStargazers:4208Issues:0Issues:0