edzq / CIS5528_Project

This is the project repository of CIS5528 Project in 2023 Spring

Named Entity Extraction for BioMedical text

This is the project repository of CIS5528 Project in 2023 Spring, Temple University.

Team Members: Qi Zhang, Yihan Zhang, Xinwen Zhang

Task Description

Dataset

We are going to use three kinds of datasets: BC2GM, BC5CDR and NCBI. Recommeding the HuggingFace Dataset Library to load these copora (Click the following dataset name can redict to the HuggingFace dataset page).

1. BC2GM

2. BC5CDR

3. NCBI

Experiments

The experiment code of our project please see the folder 'BERT-Experiments' and 'GPT-BioNER'.