Edmund Miller's repositories
Mastodon-Bioinformatics
Most simple webapp to bulk follow bioinformatics accounts on Mastodon.
bioinformatics-vale
A Vale-compatible implementation of common Bioinformatics terms
edmundmiller.dev
My personal site
vcf2maf-rs
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
1password-teams-open-source
Get a free 1Password Teams membership for your open source project
awesome-duckdb
🦆 A curated list of awesome DuckDB resources
big-AGI
💬 Personal AI application powered by GPT-4 and beyond, with AI personas, AGI functions, text-to-image, voice, response streaming, code highlighting and execution, PDF import, presets for developers, much more. Deploy and gift #big-AGI-energy! Using Next.js, React, Joy.
cli
GitHub’s official command line tool
fprint-clear-storage
Python script to fix Framework fingerprint on a NixOS install
hyperopt
Nextflow pipeline for hyperparameter optimization of machine learning models
lunchmoney-amazon
Categorize, and add order numbers, to Amazon transactions in LunchMoney
multi-package-containers
Testing building mulled containers for multi-requirement tools.
nextflow
A DSL for data-driven computational pipelines
nf-core-statistics
A Github Action to gather Github stats about an organization. Written by Harrison Hogg for Spotify Backstage and slightly adapted to nf-core.
nf-whisper
Proof-of-concept Nextflow pipeline to interact with OpenAI Whisper
trunk-nf
Classic hello world script in Nextflow language
viralintegration
Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.