DV Klopfenstein, PhD (dvklopfenstein)

dvklopfenstein

Geek Repo

Location:Philadelphia, PA, USA

Home Page:https://orcid.org/0000-0003-0161-7603

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DV Klopfenstein, PhD's repositories

PrincetonAlgorithms

Python implementations of selected Princeton Java Algorithms and Clients by Robert Sedgewick and Kevin Wayne

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ReactomePy

Explore biomolecular pathways in Reactome from the command-line or a Python script

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pmidcite

Turbocharge a PubMed literature search with forward/backward citation chaining (snowballing) w/citation counts/data from the NIH

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goatools_simulation

Stochastic Gene Ontology Enrichment Analyses (GOEA) Simulations in manscript + Multiple-Test Correction Simulations

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enrichmentanalysis

Generic enrichment analysis

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ascii_plots

Convenience function for quick and dirty data analysis

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bcftools

This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib

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biocode

Various Biology Links

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cv_and_thesis

Curriculum Vitae and PhD thesis of D. V. Klopfenstein

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bioconda-recipes

Conda recipes for the bioconda channel.

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data_pa_gov

Work with the opendata from the Commonwealth of Pennsylvania

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genanki

A Python 3 Library for Generating Anki Decks

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gossto

Gene Ontology Semantic Similarity Tool

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journalclub

Repo for Dampier computational journal club

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khal

:calendar: CLI calendar application

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nanocomp

Comparison of multiple long read datasets

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prtgitlog

Print 'git log' output in a concise and informative format

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pubs

Your bibliography on the command line

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pybluez

Bluetooth Python extension module

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systemupdates_v0p2

System Update Archive

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travis_example

Simple Travis Example

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