Beast code in Giters

Kevin Lewis's starred repositories

Assortment of useful scripts

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Reference-based compression of SRA data

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Tests for samtools (including iRODS-specific tests)

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patch files for various releases of samtools

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Tools (written in C using htslib) for manipulating next-generation sequencing data

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Scripts I use on Git repositories

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Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

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Reference-based compression of SRA data

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