douxiaotian

ClinicalTransformerRelationExtraction

A project for developing transformer-based models for clinical relation extraction

ConSERT

Code for our ACL 2021 paper - ConSERT: A Contrastive Framework for Self-Supervised Sentence Representation Transfer

Kats

Kats, a kit to analyze time series data, a lightweight, easy-to-use, generalizable, and extendable framework to perform time series analysis, from understanding the key statistics and characteristics, detecting change points and anomalies, to forecasting future trends.

swav

PyTorch implementation of SwAV https//arxiv.org/abs/2006.09882

awesome-domain-adaptation

A collection of AWESOME things about domian adaptation

biobert

BioBERT: a pre-trained biomedical language representation model

causal-text-papers

Curated research at the intersection of causal inference and natural language processing.

CLEVE

Source code for ACL 2021 paper "CLEVE: Contrastive Pre-training for Event Extraction"

ClinicalTransformerNER

a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms

course-content-dl

cpic-data

CPIC Data definitions and code to use that data

decision-transformer

Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling.

deepex

Code repo for EMNLP21 paper "Zero-Shot Information Extraction as a Unified Text-to-Triple Translation"

DEEPScreen

DEEPScreen: Virtual Screening with Deep Convolutional Neural Networks Using Compound Images

DIML

Towards Interpretable Deep Metric Learning with Structural Matching

DNABERT

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

FoID

Dataset and codebase for NeurIPS 2021 paper: Exploring Forensic Dental Identification with Deep Learning

kg-bert

KG-BERT: BERT for Knowledge Graph Completion

lm-bio-kgc

Using pretrained language models for biomedical knowledge graph completion.

nam

Neural Additive Models (Google Research)

Prep4DeepDEP

R package to prepare data for DeepDEP

PURE

NAACL'2021: A Frustratingly Easy Approach for Entity and Relation Extraction

representation-causal-public

schema

Framework for integrating heterogeneous modalities of data

SimCSE

EMNLP'2021: SimCSE: Simple Contrastive Learning of Sentence Embeddings

SimpleEMRSystem

The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting laboratory-based research studies of EMR design and usability.

Synthetic-Controls-in-Continuous-Time

Policy Analysis using Synthetic Controls in Continuous-Time

The-world-of-faculty

resources for faculty

Transformer-Hawkes-Process

Code for Transformer Hawkes Process, ICML 2020.

transformers

🤗 Transformers: State-of-the-art Natural Language Processing for Pytorch, TensorFlow, and JAX.