Jason Dou (douxiaotian)

douxiaotian

Geek Repo

Company:Harvard University

Location:Anywhere on earth

Home Page:jasondou.org

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Jason Dou's repositories

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SEACells

SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data

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A-NHP

Public Repo for Attentive-NeuralHawkesProcess (A-NHP)

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ACL2022_KnowledgeNLP_Tutorial

Materials for ACL-2022 tutorial: Knowledge-Augmented Methods for Natural Language Processing

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AMBER

Automated Modelling for Biological Evidence-based Research

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anhp-andtt

Codebase for Attentive Neural Hawkes Process (A-NHP) and Attentive Neural Datalog Through Time (A-NDTT)

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counterfactual-tpp

Code and real data for the paper "Counterfactual Temporal Point Processes", available at arXiv.

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CS-Notes

:books: 技术面试必备基础知识、Leetcode、计算机操作系统、计算机网络、系统设计

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EconML

ALICE (Automated Learning and Intelligence for Causation and Economics) is a Microsoft Research project aimed at applying Artificial Intelligence concepts to economic decision making. One of its goals is to build a toolkit that combines state-of-the-art machine learning techniques with econometrics in order to bring automation to complex causal inference problems. To date, the ALICE Python SDK (econml) implements orthogonal machine learning algorithms such as the double machine learning work of Chernozhukov et al. This toolkit is designed to measure the causal effect of some treatment variable(s) t on an outcome variable y, controlling for a set of features x.

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EHRKit-2022

A Python Natural Language Processing Toolkit for Electronic Health Record Texts

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flair

A very simple framework for state-of-the-art Natural Language Processing (NLP)

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gen-arg

Code for paper "Document-Level Argument Extraction by Conditional Generation". NAACL 21'

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gluon-ts

Probabilistic time series modeling in Python

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HighMMT

Towards Modality and Task Generalization for High-Modality Representation Learning

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iBKH

iBKH: The integrative Biomedical Knowledge Hub

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Leetcode

🎓Leetcode solutions in Python 📚

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Multimodal-Transformer

[ACL'19] [PyTorch] Multimodal Transformer

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PlotNeuralNet

Latex code for making neural networks diagrams

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PyTorch-VAE

A Collection of Variational Autoencoders (VAE) in PyTorch.

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qagnn

[NAACL 2021] QA-GNN: Question Answering using Language Models and Knowledge Graphs

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rCausalMGM

R package for causal MGM algorithms implemented in C++

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rlkit

Collection of reinforcement learning algorithms

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SCOT

Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data

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spatial-alignment

Alignment of spatial genomics data using deep Gaussian processes

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survey-of-DL-for-scRNA-seq-analysis

Deep learning tackles single-cell analysis - A survey of deep learning for scRNA-seq analysis

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TDC

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development

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