Dennis's repositories
Anisotropy
These are programs that deal with anisotropy (both resolution and sampling)
Language:PythonMIT000
ArtiaX
ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
Language:PythonGPL-3.0000
autoalign_dynamo
automated on-the-fly tilt-series alignment
Language:MATLAB000
basic-latex
A decent, simple LaTeX template
Language:TeX000
DeePiCt
Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (convolutional neural networks).
Language:PythonApache-2.0000
fidder
Detect and erase gold fiducials in cryo-EM images
Language:PythonNOASSERTION000
napari
napari: a fast, interactive, multi-dimensional image viewer for python
Language:PythonBSD-3-Clause000
napari-animation
A napari plugin for making animations
Language:PythonNOASSERTION000
PyTom
PyTom software for cryo-tomogram processing
Language:PythonGPL-2.0000
relion2dynamo
Simple package to convert star files to Dynamo tables.
Language:PythonBSD-3-Clause000
Language:Python000
teamtomo.github.io
A collaborative knowledge sharing platform for the cryo-ET community
Language:MATLABNOASSERTION000