Dan Leehr's repositories
movielens-sqlite
Bash script to convert movielens dataset to sqlite database
py-expr-engine
Python Expression Engine for CWL
rr-intro-python
rr intro in IPython Notebook format
2015-06-01-reproducible-science-idigbio
Website for the Reproducible Science Workshop to be taught at iDigBio, June 1-2, 2015
2015-09-24-reproducible-science-duml
Website for the Reproducible Science Workshop to be taught at the Duke Marine Lab, September 24-25, 2015
awesome-osx
:memo: A curated list of awesome applications, softwares, tools and shiny things for OS X.
bootstrap-for-ember
Bootstrap for Ember.js
cwl-volumebug
Demo of CWL issue ignoring tmpdir/outdir for subworkflows
DEMO-Docker
Demo docker images for docker-pipeline
dplace-iEvoBio2014
iEvoBio 2014 lightning talk
dplace-vagrant
Vagrant/ansible configuration for D-PLACE
dray
An engine for managing the execution of container-based workflows.
dryad-repo
Dryad is a repository for data underlying scientific literature. Dryad allows investigators to validate published findings, explore new analysis methodologies and repurpose the data for research questions unanticipated by the original authors. The core code of Dryad comes from the DSpace repository software. Developers using the Dryad code should first familiarize themselves with DSpace. Documentation specific to the Dryad codebase can be found in the Dryad wiki.
dryad-software-bazaar
Slides for Dryad API demo at iEvoBio 2014 Software Bazaar
fcdb-api
JSON/REST API for FossilCalibrations
fcdb-api-prototypes
Prototypes for FCDB API
FossilCalibrations
Fossil calibrations database
gcb-academy-python
Python Lessons for GCB Academy course on Scientific Computing
kentUtils
UCSC command line bioinformatic utilities
libgit2
The Library
listenlog
A rails application that keeps track what goes in my ears.
machine
Machine management for a container-centric world
pagetest
gh pages test
PlayPen
iOS empty project
ReFlow
Django-based Repository for Flow Cytometry Data
SAMTextView
Add a placeholder to UITextView.
traitdb-docker
Docker containers for running TraitDB
workflows
Community maintained workflows & tools (with examples)