Transcriptome Annotation by Modular Algorithms
This software was designed for processing Iso-Seq data and other long read transcriptome data.
See wiki for manual: https://github.com/GenomeRIK/tama/wiki
If you have any questions on how to run TAMA please post them in the Github issues for this repo and I will respond as soon as possible. It is also worth checking the closed issues to see if your question has already been answered.
In case I am not responsive on the issues page you can email me directly at (sometimes I don't get the notifications): GenomeRIK at gmail dot com
To cite TAMA please use our paper in BMC Genomics: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-020-07123-7