dibaggioj / bioinformatics-rosalind

A collection of completed bioinformatics exercises from the Rosalind project and "Bioinformatics Algorithms: an Active Learning Approach" textbook by Phillip Compeau and Pavel Pevzner

Bioinformatics with Rosalind

A collection of completed bioinformatics exercises from the Rosalind project and "Bioinformatics Algorithms: an Active Learning Approach" textbook by Phillip Compeau and Pavel Pevzner

Prerequisites

Latest versions of Python 3 and pip

Getting Started

Run pip install to install requirements from the requirements.txt file

Running

Solutions can be executed like

python textbook/src/ba1b.py textbook/data/ba1b.txt textbook/output/ba1b.txt
python stronghold/src/ex_13__overlap_graphs.py stronghold/data/ex_13.txt stronghold/output/ex_13.txt

Authors

• John DiBaggio