dfci's repositories
matchminer
MatchMiner: An open source computational platform for matching genomic profiles to precision cancer medicine clinical trials
matchengine-V2
Open source engine for matching cancer patients to precision medicine clinical trials (V2).
matchminer-api
A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials
matchminer-ui
A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials
cbioportal-frontend
React Frontend of cBioPortal :tada:
cbioportal-frontend-ARCHIVE
React Frontend of cBioPortal :tada:
omero-iviewer
An OMERO.web app allowing to view images
genome-nexus
Interpreting cancer genomics data 🧬
apache_exporter
Prometheus exporter for Apache.
cbioportal
cBioPortal for Cancer Genomics
cbioportal-core
Externalized cBioPortal Core
cbioportal-frontend-documented-ARCHIVE
React Frontend of cBioPortal :tada:
datahub-study-curation-tools
Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.
hotspot_logreg
Calling hotspots using logistic regression
httpd_exporter
A apache exporter for prometheus via mod_status.
matchminer-scripts
A collection of scripts which may be useful for deploying or utilizing MatchMiner.
mongodb_exporter
MongoDB exporter for prometheus.io
mongodb_exporter-1
A Prometheus exporter for MongoDB including sharding, replication and storage engines
nginx-prometheus-exporter
NGINX Prometheus Exporter for NGINX and NGINX Plus
oncotreenx
light networkx wrapper around the oncotree data structure
openmicroscopy
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.
trial_llama-prototype
AI trial search engine - Proof of Concept prototype