DBinary

Startup-CTO-Handbook

The Startup CTO's Handbook, a book covering leadership, management and technical topics for leaders of software engineering teams

DWPose

"Effective Whole-body Pose Estimation with Two-stages Distillation" (ICCV 2023, CV4Metaverse Workshop)

scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data

emotion2vec

[ACL 2024] Official PyTorch code for extracting features and training downstream models with emotion2vec: Self-Supervised Pre-Training for Speech Emotion Representation

pySCENIC

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

llms_paper

该仓库主要记录 LLMs 算法工程师相关的顶会论文研读笔记（多模态、PEFT、小样本QA问答、RAG、LMMs可解释性、Agents、CoT）

SnapATAC2

Single-cell epigenomics analysis tools

single-cell-transformer-papers

single_cell_tutorial

单细胞分析的中文pipeline

pycisTopic

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

PromptNucSeg

[ECCV 2024] Code for "Unleashing the Power of Prompt-driven Nucleus Instance Segmentation"

mofapy2

Multi-omics factor analysis v2

IReNA

R package IReNA

STAligner

STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.

CEFCON

Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data

simba

SIMBA: SIngle-cell eMBedding Along with features

scEntropy

scEntropy method and scEGMM framework

Multi-Drug-Transfer-Learning

Pre-clinical drug discovery faces the low efficiency dilemma. One of the reasons is the lack of cross-drug efficacy evaluation infrastructure at patient level. Here we propose Patient multiple drug learning(P-MDL) task, and construct the P-MDL dataset and model zoo. The best P-MDL model DSN-adv achieve SOTA in all of the 13 tumor types.

CACIMAR

cross-species analysis of cell identities, markers and regulations

DouLabRotation_2023

This repository was used to contain the tutorials of telemere length calculation for single cell DNA-seq data.

FateMapper

single cell lineage tracing analysis tool

dbinary.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Epiverse

Epiverse is the fundamental package for single cell Assay for Transposase-Accessible Chromatin using sequencing (scATAC-seq) with Python.

academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

jekyll-theme-chirpy

A minimal, responsive, and powerful Jekyll theme for presenting professional writing

jiang-junyao.github.io

CV

lab

Lhy_Machine_Learning

李宏毅2021春季机器学习课程课件及作业

pesoto.github.io

wwg

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