david-hoffman

pyotf

python functions for simulating optical transfer functions

pydecon

Image deconvolution algorithms in python

Igor-Data-Analysis

Igor Pro data analysis procedures

dphtools

Tools for optics and image analysis

peaks

A package of utilities for finding, fitting and analyzing punctate image data.

FSRS-LabVIEW

LabVIEW VI's for running a femtosecond stimulated Raman (FSRS) instrument

Probabilistic-Programming-and-Bayesian-Methods-for-Hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

advent-of-code-2018

Advent of Code 2018

advent-of-code-2019

Advent of Code 2019

david-hoffman

profile

david-hoffman.github.io

Portfolio Website

JaneliaMLCourse

numba_tutorial_scipy2016

Numba tutorial materials for Scipy 2016

quot

Many ways to find dots in fluorescence microscopy images

SimpleITK-Notebooks

Jupyter notebooks for learning how to use SimpleITK

SMolPhot

SMolPhot is an open-source operating system independent data analysis and visualization software package for data acquired by single molecule localization microscopy methods such as photo-activation localization microscopy. SMolPhot is written in python which make it platform independent and easy to develop open source software package.