Donald Danforth Plant Science Center's repositories
plantcv-workshop
PlantCV Workshops
plantcv-v2-paper
PlantCV image analysis scripts used in the PlantCV v2.0 paper
apps-phenotyping
The following are scripts and instruction necessary to set up 4 Raspberry Pi Powered Imaging Platforms
phenome2020-workshop
Phenome 2020 Digital Phenotyping workshop materials
bioinformatics
The Donald Danforth Plant Science Center Bioinformatics Core Facility public repository
plantcv-nappn2021-workshop
NAPPN 2021 Conference PlantCV virtual workshop materials
htcondor-tools
A collection of scripts for building and running HTCondor jobs and workflows
plantcv-seeds
Seed phenotyping with PlantCV
Eveland_NSF_Outreach
Repository for Outreach Activities
persistent_homology
Persistent homology
plantcv-dev-scripts
Development image analysis scripts
plantcv-setaria-molplant
PlantCV image analysis scripts used in Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, et al. A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria. Mol Plant. 2015;8: 1520–1535.
brachypodium-heat-drought
brachypodium project
htcondor-workshop
HTCondor workshop training materials
plantcv-data
PlantCV documentation and testing data
plantcv-encode
PlantCV workflows for the Brachypodium ENCODE project
plantcv-interactive-tutorials
PlantCV tutorials that include interactive widgets for human-in-the-loop workflows
plantcv-tutorial-segment-image-series
Tutorial for using PlantCV segment image series