Donald Danforth Plant Science Center's repositories
plantcv-tutorial-v4-VIS-single-plant
PlantCV Tutorial using release-4.0 for single plant, VIS image (RGB) analysis
brachypodium-heat-drought-paper
PlantCV python scripts for image analysis; R scripts for data filtering, organizing, and analysis; shell scripts for SNP calling and population structure estimation; input data files for all analyses
data-science-tools
Data Science Tools
plantcv-geospatial
Geospatial add-on package to PlantCV
plantcv-stomata-tutorial
interactive tutorial for analyzing microscopy images of stomata using PlantCV
plantcv-tutorial-germination
Notebook for performing germination studies using plantCV
plantcv-tutorial-threshold
Tutorial for understanding Thresholding using PlantCV.
plantcv-tutorial-watershed
watershed tutorial
plantcv-annotate
add-on package for PlantCV annotation tools
plantcv-tutorial-template
A template for new PlantCV tutorial repositories
5702-plantcv
Materials for Course 5702
aws-tools
Danforth Center tools for working with AWS
KIG_v2
Updated version of the KIG list using OrthoFinder
plantcv-stomata-tutorial-pcv4
Tutorial for analyzing microscopy images of stomata using PlantCV version 4.0
plantcv-tutorial-photosynthesis-multi
Tutorial for using PlantCV for analysis of photosynthesis images that contain multiple objects (such as multiple plants or leaves).
plantcv-web
PlantCV website repository
tobacco-heat-paper
Documents and scripts related to publication on High Lipid Producing tobacco (Nicotiana tabacum).