cvignac / DiGress

code for the paper "DiGress: Discrete Denoising diffusion for graph generation"

cvignac/DiGress Issues

Question about the architecture (graphTransformer)
Updated 5 months ago2
Checkpoint for QM9
Closed a year ago3
Questions on the exact setup used for the experiments
Updated 6 months ago1
Reporting KL divergence loss for training step
Updated 6 months ago
Something wrong with utils.EMA
Updated 6 months ago2
I will appreciate it if you could send me a mail
Updated 6 months ago2
I would very much appreciate it if you shared
Updated 6 months ago
Your work in this paper is of great significance and it is my honor to present it in our group meeting. For my better understanding and presentation about your work, would you mind sharing me your presentation slides and viedo about this paper? I would very much appreciate it if you shared your slides to me, thanks!
Updated 6 months ago
There occurs nan when computing test/X_logp, test/E_logp, and test/y_logp with "SumExceptBatchMetric" in abstract_metrics.py
Updated 6 months ago
The planar model released performed better than described in the paper
Updated 6 months ago
About node feature in non-molecular datasets
Updated 6 months ago
Checkpoints for other datasets
Updated 6 months ago
About experiment on Comm20.
Updated 7 months ago2
meet error while running
Closed 7 months ago
wrong with No process_path using dataset=guacamol
Closed 7 months ago4
MOSES node type distribution doesn't sum to one
Closed 7 months ago1
Import problem in training stage
Updated 7 months ago3
About nodes not connected
Updated 7 months ago
Cross-entropy in minibatching
Closed 8 months ago5
Reproduce SMILES strings from the PyTorch_Geometric Dataset
Closed 8 months ago2
Reproducing DiGress results on the Community-20 dataset
Closed 8 months ago5
Validating on test data
Closed 8 months ago1
Why extra_features not used in the regressor?
Updated 8 months ago1
About the checkpoint of DiGress on QM9
Updated 8 months ago
ModelCheckpoint fail to store
Updated 8 months ago5
Conditional Graph Generation Issue
Updated 8 months ago3
Discrepancy for MOSES dataset evaluation protocol
Closed 10 months ago2
Computing likelihood
Updated 10 months ago1
Discrepancy between the paper and the guidance branch's readme?
Closed 10 months ago1
size mismatch error during inference using the provided guacamole checkpoint
Updated 10 months ago1
Confused about the sampling process
Closed a year ago5
New dataset - graph labels
Closed a year ago3
Customized heterogeneous graph generation
Updated a year ago
Repeat that there is a problem with your work
Updated a year ago2
novelty in QM9 dataset is so small, why?
Closed a year ago1
Validation results show nan all the time
Closed a year ago4
evaluate_guidance_sampling.yaml
Updated a year ago
Approximation of regressor guidance
Updated a year ago4
AttributeError: 'str' object has no attribute '__name__' during classification/regresion pretraining on the network dataset module built on my own
Closed a year ago1
Segmentation fault in the code aligning molecules for visualization
Closed a year ago8
questions about the hyperparameters
Closed a year ago2
pytorch_lightning.utilities.exceptions.MisconfigurationException
Closed a year ago2
Does the graph transformer take graph connectivity into account?
Closed a year ago2
beta_bar_t equation, might be error in paper
Closed a year ago1
Questions about Metrics (1. Scaf on MOSES & 2. FCD on GuacaMol)
Closed a year ago1
Extending molecule with partial charges
Closed a year ago2
Bug in self-attention?
Closed a year ago2
Batch_size can only be set less than 8 for sbm dataset on NVIDIA GeForce RTX 3090
Closed a year ago2
Substructure conditioned generation
Updated a year ago1
Docker image
Updated a year ago2