Reproducing DiGress results on the Community-20 dataset

Question

Reproducing DiGress results on the Community-20 dataset

GhaliaRehawi opened this issue a year ago · comments

I am trying to reproduce the results of Digress on the small community-20 dataset.
Unfortunately, I can't get the results that you have in the paper, could you provide the list of hyperparameters that were used, basically the ones in general_default.yaml and train_default.yaml. Thank you!

Clement Vignac · Answer 1 · Fri Aug 25 2023 20:48:54 GMT+0800 (China Standard Time)

Hello, the configuration is in the config/experiments/comm20.yaml file.
You should run this command:
CUDA_VISIBLE_DEVICES=0 python3 main.py +experiment=comm20 dataset=comm20 general.gpus=1

Ghalia Rehawi · Answer 2 · Fri Aug 25 2023 21:57:55 GMT+0800 (China Standard Time)

I see, thanks a lot for the quick reply

Yikang Li · Answer 3 · Thu Aug 31 2023 11:14:40 GMT+0800 (China Standard Time)

Hello, the configuration is in the config/experiments/comm20.yaml file. You should run this command: CUDA_VISIBLE_DEVICES=0 python3 main.py +experiment=comm20 dataset=comm20 general.gpus=1

I have used this command but I am keep getting this error:
:228: RuntimeWarning: to-Python converter for std::pair<double, double> already registered; second conversion method ignored.
Error executing job with overrides: ['+experiment=comm20', 'dataset=comm20', 'general.gpus=1']
File "/gpfs52/data/maiziezhou_lab/yikang/gpu/DiGress/src/datasets/spectre_dataset.py", line 42, in download
raise ValueError(f'Unknown dataset {self.dataset_name}')
ValueError: Unknown dataset comm-20
I tried to change the name from comm-20 to comm20 in the comm20.yaml. But it does not work.

EasyZN · Answer 4 · Tue Oct 31 2023 01:09:42 GMT+0800 (China Standard Time)

Hi, I have met the same problem as:
ValueError: Unknown dataset comm-20

Do you figure out how to fix it?

Hello, the configuration is in the config/experiments/comm20.yaml file. You should run this command: CUDA_VISIBLE_DEVICES=0 python3 main.py +experiment=comm20 dataset=comm20 general.gpus=1

I have used this command but I am keep getting this error: :228: RuntimeWarning: to-Python converter for std::pair<double, double> already registered; second conversion method ignored. Error executing job with overrides: ['+experiment=comm20', 'dataset=comm20', 'general.gpus=1'] File "/gpfs52/data/maiziezhou_lab/yikang/gpu/DiGress/src/datasets/spectre_dataset.py", line 42, in download raise ValueError(f'Unknown dataset {self.dataset_name}') ValueError: Unknown dataset comm-20 I tried to change the name from comm-20 to comm20 in the comm20.yaml. But it does not work.

Clement Vignac · Answer 5 · Wed Nov 22 2023 23:40:35 GMT+0800 (China Standard Time)

Hello, I have replaced all the references to comm-20 by comm20. It should hopefully fix the issue.