ctjsw

ctjsw's starred repositories

CRISPR-meets-Docker

Docker images and IPython notebooks (bash kernel) for common CRISPR bioinformatic analysis: CRISPOR, CRISPResso and MAGeCK

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MAGeCKFlute

Integrative analysis pipeline for pooled CRISPR functional genetic screens

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TrafficMonitor

这是一个用于显示当前网速、CPU及内存利用率的桌面悬浮窗软件，并支持任务栏显示，支持更换皮肤。

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ponysay

Pony rewrite of cowsay.

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Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research, 18: 821-829

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megahit

Ultra-fast and memory-efficient (meta-)genome assembler

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CRISPResso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

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Intro-to-R

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gmt

The Generic Mapping Tools

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plastNN

Code for plastNN

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higlass-scalable-insets

Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.

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fishualize

The fishualize package provides color scales and silhouettes for plotting in R based on nature’s most stunning and colorful organisms: teleost fishes (with a few chondrichthyan cameos).

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