Jason Chin's repositories
wavefront-aln
A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
dash13-KIR-MHC-assemblies
Repository for code and small data set for Dash13 Hackathon
starview_app
a quick exercise using three-d library (https://github.com/asny/three-d) visualizing a 3D Spaticial Transcriptom data taset
burn
BURN: Burn Unstoppable Rusty Neurons
candle
Minimalist ML framework for Rust
candle-gfn
a experimental implementation of GFN in Candle
docker-headless-vnc-container
Collection of Docker images with headless VNC environments
flyte
Kubernetes-native workflow automation platform for complex, mission-critical data and ML processes at scale. It has been battle-tested at Lyft, Spotify, Freenome, and others and is truly open-source.
gradio
Build and share delightful machine learning apps, all in Python. 🌟 Star to support our work!
hdf5-rust
HDF5 for Rust
HumanIdiogramLibrary
Resource of human chromosome schematics & images
llama2.c
Inference Llama 2 in one file of pure C
llm-chain
`llm-chain` is a powerful rust crate for building chains in large language models allowing you to summarise text and complete complex tasks
llm_playground
llm_playground
long-read-pipelines
Long read production pipelines
nanoGPT
The simplest, fastest repository for training/finetuning medium-sized GPTs.
pgr-tk-notebooks
Jupyter Notebooks Using PGR-TK for various human pangenome analysis tasks
rust-htslib
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.
slivar
genetic variant expressions, annotation, and filtering for great good.
TheHumanPangenome
Creation and Toolsets for a Long-Read Trio Based Human Pangenome