cmap / slice-reports

slice-reports

A module for moving compounds/asssets from project A to project B.

Warning: This would make changes to existing files so make sure to use a test directory on s3 (for example analysis.clue.io/etl/) while testing.

1. Checkout this repository
2. Edit src/input.json to reflect the changes you would like to make

• screen_root - Should point to the S# root of the screen (for e.g analysis.clue.io)
• src_project - The project that holds the pert that needs to be moved
• dest_project - The project that the pert would be moved into
• pert_id - The pert_id to move to destination project
• pert_plate - The pert plate that the pert_id is on

3. cd to the checkout directory and run
   • npm install
   • tsc --outDir dist to compile the src
   • npm run start
4. The last command will do the following
   • Check out the src and destination projects into the etl folder
   • Copy the pert_id folder from the src project to the det project c.
   • Update LEVEL4 and LEVEL5 csv combat files with the dest project name
   • Delete pert_id folder from the src project
   • Sync the src and det projects back to s3 using the aws s3 sync delete flag