sars-cov2-pangenome-analysis
https://registry.opendata.aws/ncbi-covid-19/
aws s3 ls --no-sign-request s3://sra-pub-sars-cov2/
https://www.ncbi.nlm.nih.gov/sra/docs/sra-aws-download/
https://registry.opendata.aws/ncbi-sra/
mount and link storage
This didn't work because we can't download the entire thing to the baby little codespaces disk size
Need to download iteratively
mkdir -p data/ncbi-cli-download cd data/ncbi-cli-download datasets download virus genome taxon SARS-CoV-2
conda install -c conda-forge parallel
cut -d, -f1 sequences.csv | tail -n+2 | less