Yi Hernandez's starred repositories
Masters-Project
This is the main code for my master's project, in which enzymatic constraints were added to E. coli GEM iML1515 based on the GECKO method, and BOF estimation methods BTW and HIP were implemented, using Python.
iML1515_GP
GEM-PRO for the E. coli iML1515 metabolic model
phd-thesis-template
A LaTeX / XeLaTeX / LuaLaTeX PhD thesis template for Cambridge University Engineering Department (CUED)
container_recipes
Repository with all my container recipes 👩🍳
dataweek-workshop
Machine learning workshop using Python, pandas, and scikit-learn. The first half of the day covered supervised classification using Logistic Regression and how to use cross validation to evaluate your models . The second half of the day covered unsupervised clustering with Kmeans as well as an overview of the data science process.
TeachingDemos
Bioinformatics related demos and tutorials using the R programming language
ensembl-rest
Language agnostic RESTful data access to Ensembl data over HTTP