Chaz Reid's starred repositories
bioinformatics-workbook
Bioinformatics Workbook repository
macos_security
macOS Security Compliance Project
for-open-source
Get a 1Password team account for free to support your open source initiatives!
django-DefectDojo
DevSecOps, ASPM, Vulnerability Management. All on one platform.
awesome-cdk
A collection of awesome things related to the AWS Cloud Development Kit (CDK)
jupyter_ascending
Ascend your Jupyter Notebook usage
jupyter_ascending.vim
Vim plugin to interact with jupyter_ascending
aws-well-architected-labs
Hands on labs and code to help you learn, measure, and build using architectural best practices.
deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
snakemake-workflow-catalog
A statically generated catalog of available Snakemake workflows
rogue-jndi
A malicious LDAP server for JNDI injection attacks
app-support-prototype
A place to explore how we might support "apps" in Dockstore. These are long-running, interactive web services rather than batch workflows.
nixos-config
My NixOS configurations.
collectd-cloudwatch
A collectd plugin for sending data to Amazon CloudWatch
parliament
AWS IAM linting library
Wochenende
Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3
bio-cwl-tools
CWL CommandLineTool descriptions for biology/life-sciences related applications
mongo-express
Web-based MongoDB admin interface, written with Node.js and express