Cancer Genomics Prato (CGP) Lab (cgplab)

Cancer Genomics Prato (CGP) Lab

cgplab

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Cancer genomics at "Sandro Pitigliani" Medical Oncology Department, Hospital of Prato, Istituto Toscano Tumori, Prato, Italy

Location:Prato, Italy

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Cancer Genomics Prato (CGP) Lab's repositories

RadAR

A tool to perform comprehensive analysis of high-dimensional radiomic datasets

Language:RLicense:MITStargazers:12Issues:3Issues:9

PAMES

Tool to estimate purity of tumor samples exploiting DNA Methylation data

Language:RLicense:GPL-3.0Stargazers:10Issues:5Issues:10

ddSeeker

A tool for processing Bio-Rad ddSEQ single cell RNA-seq data

Language:PythonLicense:GPL-3.0Stargazers:4Issues:4Issues:6

Rockermeth

A tool for discovering Differentially Methylated Regions

Language:RLicense:MITStargazers:3Issues:4Issues:2

MIMESIS

A package to identify type/subtype of tumor samples and estimate tumor content using minimal DNA-methylation signatures

Language:RLicense:MITStargazers:1Issues:2Issues:0

covidapp

A web application implementing models to predict ICU admission for COVID-19 patients based on clinical, laboratory and imaging parameters

Language:RLicense:MITStargazers:0Issues:3Issues:0
Language:RStargazers:0Issues:0Issues:0

PAMESdata

Precomputed informative CpG sites and CpG islands to be used with PAMES package

Language:RLicense:GPL-3.0Stargazers:0Issues:3Issues:0

Rocker-meth

Rockermeth is a tool for discovering Differentially Methylated Regions (DMRs)

License:MITStargazers:0Issues:1Issues:0