cepacia

paper-reading

深度学习经典、新论文逐段精读

labelImg

LabelImg is now part of the Label Studio community. The popular image annotation tool created by Tzutalin is no longer actively being developed, but you can check out Label Studio, the open source data labeling tool for images, text, hypertext, audio, video and time-series data.

ceph

Ceph is a distributed object, block, and file storage platform

translators_CN

Zotero translator中文网页抓取翻译器🎉This is Zotero translators for Chinese Sites(beta), not the official Zotero repo

pyarmor

A tool used to obfuscate python scripts, bind obfuscated scripts to fixed machine or expire obfuscated scripts.

OpenCV3-Intro-Book-Src

:blue_book:《OpenCV3编程入门》书本配套源码 |《Introduction to OpenCV3 Programming》Book Source Code

CrypTen

A framework for Privacy Preserving Machine Learning

bioicons

A library of free open source icons for science illustrations in biology and chemistry

Machine_Learning_Resources

:fish::fish::fish: 机器学习面试复习资源

English-Writing

Enhance Your English Writing for Science Research 写论文英语素材

clusterProfiler

:bar_chart: A universal enrichment tool for interpreting omics data

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

SpliceAI

A deep learning-based tool to identify splice variants

mixcr

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

immunarch

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

tasks

Package tasks is an easy to use in-process scheduler for recurring tasks in Go

NGSCheckMate

Software program for checking sample matching for NGS data

etable

Data table structure in Go, now developed at https://github.com/cogentcore/core/tree/main/tensor

DeepTCR

Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

SODA

Official code library for SODA: A Large-scale Benchmark for Small Object Detection.

SigMA

Mutational signature analysis for low statistics SNV data

spy

Spy - Watches for file changes, restarts stuff

partis

B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction

metapi

A general metagenomics data mining system focus on robust microbiome research

GPMeta

A GPU-accelerated method for ultrarapid pathogen identification from metagenomic sequences.

vindr-spinexr

VinDr-SpineXR: A deep learning framework forspinal lesions detection and classification from radiographs

HUBDesign

Hierarchical Unique Bait Design for simultaneous and specific capture of known and novel targets

uvc

UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)

EasyFlyTracker