catalystneuro / distributed-coding-demo

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distributed-coding-demo

This repo contains MATLAB live scripts for interactive visualization of data from Steinmetz et al., (2019): Distributed coding of choice, action and engagement across the mouse brain[1]. These data contain electrophysiological recordings of neuronal activity across the mouse brain while the animals are engaged in a perceptual decision-making task. Data is aggregated across multiple Neuropixel probes inserted at various brain locations across multiple animals.

Joint project with Mathworks

Setup

Exploring trial-specific responses of all neurons recorded within a session

Live script: single_neuron_all_trials_demo.mlx

Sample plot:

Exploring neuron-specific responses to all trials recorded within a session

Live script: single_trial_all_units_demo.mlx

Sample plot:

[1] Steinmetz, N. A., Zatka-Haas, P., Carandini, M., & Harris, K. D. (2019). Distributed coding of choice, action and engagement across the mouse brain. Nature, 576(7786), 266-273.

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License:BSD 2-Clause "Simplified" License


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Language:MATLAB 100.0%