cll7658's starred repositories

code-server

VS Code in the browser

Language:TypeScriptLicense:MITStargazers:67535Issues:726Issues:3505

trojan

An unidentifiable mechanism that helps you bypass GFW.

Language:C++License:GPL-3.0Stargazers:18823Issues:484Issues:604

OpenWrt_x86-r2s-r4s-r5s-N1

一分钟在线定制编译 X86/64, NanoPi R2S R4S R5S R6S, 斐讯 Phicomm N1 K2P, 树莓派 Raspberry Pi, 香橙派 Orange Pi, 红米AX6, 小米AX3600, 小米AX9000, 红米AX6S 小米AX3200, 红米AC2100, 华硕ASUS, 网件NETGEAR 等主流软硬路由

Language:ShellLicense:MITStargazers:7359Issues:96Issues:1702

trojan

trojan多用户管理部署程序, 支持web页面管理

Language:GoLicense:GPL-3.0Stargazers:5402Issues:94Issues:835

BaoTa

宝塔Linux面板 - 简单好用的服务器运维面板

Language:PythonLicense:NOASSERTIONStargazers:4122Issues:100Issues:97

future

:rocket: R package: future: Unified Parallel and Distributed Processing in R for Everyone

chroma

A generative model for programmable protein design

Language:PythonLicense:Apache-2.0Stargazers:656Issues:7Issues:52

SCENIC

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.

Language:HTMLLicense:GPL-3.0Stargazers:408Issues:22Issues:300

single-cell-papers-with-code

Papers with code for single cell related papers

Language:HTMLLicense:GPL-3.0Stargazers:221Issues:5Issues:61

PyWGCNA

PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)

Language:Jupyter NotebookLicense:MITStargazers:205Issues:5Issues:111

scenicplus

SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:175Issues:10Issues:303

beakr

A Minimalist Web Framework for R

Language:RLicense:GPL-3.0Stargazers:93Issues:5Issues:18

utility

Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR

Language:RLicense:NOASSERTIONStargazers:84Issues:5Issues:5

JAFFA

JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions

Language:C++License:NOASSERTIONStargazers:83Issues:7Issues:96

TCGAplot

A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME, and promoter methylation. Methods for visualization were provided in order to easily perform integrative pan-cancer multi-omics analysis.

Language:RLicense:NOASSERTIONStargazers:63Issues:3Issues:19

docker-ubuntu-sshd

Ubuntu image with SSH & SFTP

Language:DockerfileLicense:GPL-3.0Stargazers:56Issues:3Issues:0

COSGR

Accurate and fast cell marker gene identification with COSG

Language:RLicense:BSD-3-ClauseStargazers:51Issues:1Issues:5

cerebroApp

R package containing the Cerebro application.

Language:HTMLLicense:NOASSERTIONStargazers:39Issues:4Issues:26

pwcoco

Pair-wise conditional analysis and colocalisation

Language:C++License:GPL-3.0Stargazers:35Issues:2Issues:21

ccRCC

Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma

py-merp

A Python Package for Mendelian Randomization Analysis

Language:PythonStargazers:17Issues:0Issues:0

pype

A Python Package for PheWAS Execution, Visualization, and Analysis

Language:PythonLicense:Apache-2.0Stargazers:13Issues:0Issues:0

sc2marker

Surface Marker Detection Using Single Cell Data

Language:HTMLLicense:MITStargazers:8Issues:6Issues:1

paper-code

Illustrative R-code used in publications.

Language:RStargazers:2Issues:0Issues:0

paper-code

Repository containing the R-code used in analyses for publications.

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