cMadan

openMorph

Curated list of open-access databases with human structural MRI data

calcFD

Calculate the fractal dimensionality of a 3D structure

ElGateau

ElGateau: A Library for Using the Elgato Stream Deck for Experimental Psychology Research

MRIdataviz

Supplementary to "Data visualization for inference in tomographic brain imaging"

calcSulc

Calculate sulcal morphology from FreeSurfer surface files

stl-toolbox

Visualizing and quantifying movement from pre-recorded videos: The spectral time-lapse (STL) algorithm

prism

Multiple spline regression with regularization, dimensionality reduction, and feature selection

brain3d

Online viewer of FreeSurfer surfaces and summary stats

scoreAI

Semi-automated transcription and scoring of autobiographical memory narratives

awesome-MATLAB

A curated list of awesome MATLAB toolboxes, applications, software and resources.

bids-matlab

MATLAB / Octave tools for BIDS datasets

brainbrowser-MWE-frames

Minimal BrainBrowser example, BrainBrowser -- https://brainbrowser.cbrain.mcgill.ca

cMadan

cmadan.github.io

conv_arithmetic

A technical report on convolution arithmetic in the context of deep learning

deepdream

dki-accuracy-reliability

dmd-neuro

code to compute the Dynamic Mode Decomposition (DMD), adapted for large-scale neural recordings

fsqc

fsqc is a command line to create images to quality control brain surface reconstructions generated using FreeSurfer.

grant-open-science

Mozilla Open Science mini-grant

imbFiles

Supplementary files for "An Introduction to MATLAB for Behavioral Researchers" (Madan, 2014, SAGE Publications)

jupyter-themes

Custom Jupyter Notebook Themes

L1Flattening

An L1 Image Transform for Edge-Preserving Smoothing and Scene-Level Intrinsic Decomposition

MacaqueBlender

A Python library for parametric control of a 3D rigged macaque face model for visual and social neuroscience

Open-Scholarship-Strategy-site

Website for the Open Scholarship Strategy

PRML

PRML algorithms implemented in Python

Probable-Wordlists

Version 2 is live! Wordlists sorted by probability originally created for password generation and testing - make sure your passwords aren't popular!

PSIR

Processing of PSIR data (Philips based)

vistateach

Matlab tutorials for courses in reading, image science, and MR

WOW-Boston-Github