bwbioinfo

omnivore

Omnivore is a complete, open source read-it-later solution for people who like reading.

gitleaks

Protect and discover secrets using Gitleaks 🔑

awesome-scalability

The Patterns of Scalable, Reliable, and Performant Large-Scale Systems

fzf

:cherry_blossom: A command-line fuzzy finder

pdm

A modern Python package and dependency manager supporting the latest PEP standards

pocketbase

Open Source realtime backend in 1 file

amplication

🔥🔥🔥 The Only Production-Ready AI-Powered Backend Code Generation

traefik

The Cloud Native Application Proxy

tomte

cqdg-denovo-pipeline

NextDenovo

Fast and accurate de novo assembler for long reads

variantbenchmarking

A nextflow variant benchmarking pipeline - premature

nuclei-templates

Community curated list of templates for the nuclei engine to find security vulnerabilities.

futureverse

[BETA] R package: Easily Install and Load the 'Futureverse'

chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline.

fastfetch

Like neofetch, but much faster because written mostly in C.

PowerShell

PowerShell for every system!

ente

Fully open source, End to End Encrypted alternative to Google Photos and Apple Photos

AMLclassifier

Classifier for single cell data

longshot

diploid SNV caller for error-prone reads

lazydocker

The lazier way to manage everything docker

mob-suite

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

PECAT

PECAT, a phased error correct and assembly tool

GetOrganelle

Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)

EpiNano

Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers

shimmering-obsidian

Alfred Workflow with dozens of features for controlling your Obsidian vault.

genomescope

Fast genome analysis from unassembled short reads

Winnowmap

Long read / genome alignment software

sturgeon

Sturgeon is a CNS neural network classifier