Brian Mark Anderson, PhD (brianmanderson)

brianmanderson

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Company:UNC Radiation Oncology

Location:Chapel Hill, NC

Twitter:@_BrianAnderson_

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Brian Mark Anderson, PhD's repositories

Cyclical_Learning_Rate

Code adapted from https://github.com/bckenstler/CLR

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AW_Liver_Lobes_To_Raystation

Code for taking segmentations created on the AW and transforming them into Raystation segmentations

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Easy_VGG16_UNet

This is code to create an easy to use VGG16 pre-training with UNet attached

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Raystation_Export_Oblique_Images_to_mhd

Export obliquely acquired examinations and ROIs to a folder

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CAT_Isoshifts

Create text files for shifts and Raystation code to import it

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Chung_Lab_Code

Code for the chung lab

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DGX-Commands

Basic commands that are useful while running the DGX

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Edit_Raystation_Roi_Names

Removing the colons from roi names as they don't work with IBEX

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Fixing_RT_Structures

Fixing RT structures ReferencedSOPInstanceUIDs

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Installing_Tensorflow

General notes for installing tensorflow

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keras_deeplab_v3_plus

Keras implementation of Deeplab v3+ with pretrained weights

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MD_Anderson_Intro_To_AI_Workshop

Workshop for summer AI retreat at MD Anderson

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PyPiCommands

Common commands for using pypi

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Raystation9B_PACS_AutoDownloads

repo for automatically uploading patients where each plan is a new case

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Raystation_Export_Exams_As_CSV

script for exporting exams that are given as CSV file

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Send_Email_To_Phone

Something to text me phone when code is done running

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Slicer_RT_Target_Issue

a jupyter notebook illustrating an issue with representing hollowed, or 'target' structures in 3D slicer

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tensorflow

An Open Source Machine Learning Framework for Everyone

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Updating_to_TF2

Simple jupyter notebook for updating from my keras work to TF2

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Virtual-Environment-Instructions

Instructions for creating virtual environments

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Workshop_Modules

A set of modules which might be useful for workshops

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