Data Science of Bioimages

DISK

Deep Imputation for Skeleton data

worm-swin

Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.

lmagp

Repository of the paper "Language models are good pathologists: using attention-based sequence reduction and text-pretrained transformers for efficient WSI classification"

amap-app

StainGAN

AME

Active Visual Exploration Based on Attention-Map Entropy

bee_tracking

cells_project

mmdetection

OpenMMLab Detection Toolbox and Benchmark

PromptNucSeg

Code for paper "Unleashing the Power of Prompt-driven Nucleus Instance Segmentation"

unilm

Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities

adios

CAFA

CellViT

CellViT: Vision Transformers for Precise Cell Segmentation and Classification

ComputerVision_SS24

DAMT-Net

deit

Official DeiT repository

dino

PyTorch code for Vision Transformers training with the Self-Supervised learning method DINO

gbm-seg

GlomNet

GlomNet: A HoVer Deep Learning Model for Glomerulus Instance Segmentation

H-Deformable-DETR

[CVPR2023] This is an official implementation of paper "DETRs with Hybrid Matching".

hover_net

Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

leopart

moco-v3

PyTorch implementation of MoCo v3 https//arxiv.org/abs/2104.02057

PanNukeChallenge

Siamese-Image-Modeling

SimMIM

This is an official implementation for "SimMIM: A Simple Framework for Masked Image Modeling".

solo-learn

solo-learn: a library of self-supervised methods for visual representation learning powered by Pytorch Lightning

SSDNeRF

[ICCV 2023] Single-Stage Diffusion NeRF

UniGrad