blakesweeney

Blake Sweeney's repositories

unite-taskwarrior

A unite.vim interface to taskwarrior

Language:VimL6 4 55

rna2d.js

Display RNA 2D structures with d3.js

Language:JavaScript400

sup_tag

Make tagging messages in sup easy.

Language:RubyMIT4 30

Ruby-Webmachine-Mongrel2

Use Ruby-Webmachine with Mongrel2

Language:Ruby3 30

GG2Fasta

Turn greengenes format into Fasta+JSON

Language:Python2 30

dissertation

My dissertation

Language:PostScript1 30

rfam-vs-pfam

Comparing Rfam and Pfam

Language:R100

Temperature-Variations

Site for my lab to look at temperature variation data

Language:JavaScript100

zshkit

My way-overdone zsh config scripts

Language:Shell100

git-helpers

Some random scripts I use with git

Language:Shell030

infer-rfamy-rna-types

Some work to figure out how to improve the inference of RNA types from Rfam

Language:Python040

missing-rfam-hits

Repo to try and map missing PDB hits to the correct Rfam family

Language:Python000

new-db-flow

Tool to add help new ref DB to RNAcentral's db

Language:MustacheApache-2.0030

nixpkgs

Nix Packages collection

Language:NixMIT020

official-images

Primary source of truth for the Docker "Official Images" program

Language:ShellApache-2.0030

prelims

Answers to my prelims

Language:TeX030

r2dt-utils

Some utilities for RNAcentral to work with R2DT results

Language:Rust000

rat

Compose shell commands to build interactive terminal applications

MIT000

residue-ordering

Compute ordering of residues in a PDB file

Language:Python030

rkv

A simple, humane, typed Rust interface to LMDB.

Language:RustApache-2.0020

rnc-utils

Some utilities for the RNAcentral pipeline, mostly experimental now

Language:Rust000

sub

a delicious way to organize programs

Language:ShellMIT000

superposition

Superimposing 3D structure fragments

Language:JavaScript030

VimCompletesMe

You don't Complete Me; Vim Completes Me! A super simple, super minimal, super light-weight tab completion plugin for Vim.

Language:Vim Script020