Benjamin Chu's repositories
Knockoffs.jl
Variable Selection with Knockoffs
GhostKnockoffGWAS
Package for analyzing GWAS summary statistics data
Thyrosim.jl
A mechanistic model for personalized thyroid hormone regulation dynamics
fastPHASE.jl
Julia wrapper for the fastPHASE genetics software (this is WIP)
biona001.github.io
My personal homepage
CovarianceEstimation.jl
Lightweight robust covariance estimation in Julia
DiffEqParamEstim.jl
Easy scientific machine learning (SciML) parameter estimation with pre-built loss functions
GeneticVariation.jl
Datastructures and algorithms for working with genetic variation
ghostbasil
GhostKnockoff + BASIL
groupknockoff
Building a simple executable for solving group knockoff optimization
HDF5.jl
Save and load data in the HDF5 file format from Julia
HMMBase.jl
Hidden Markov Models for Julia.
Hoffman2Tutorials
Tutorials for UCLA's Hoffman2 HPC Cluster Computing Resource for R and Julia
Julia.jl
Curated decibans of Julia programming language.
MendelImpute
Fast genotype imputation, phasing, and admixture estimation!
MendelPlots.jl
Julia package for plotting results from GWAS
public-talks
Slides for my public talks and links to videos
TraitSimulation.jl
Simulate phenotypes from any GLM model
Yggdrasil
Collection of builder repositories for BinaryBuilder.jl