bhklab / SYNERGxDB

SYNERGxDB is a comprehensive database to explore synergistic drug combinations for biomarker discovery.

SYNERGxDB Web App

Setup Instructions

• Fork and clone this repo

git clone [e-mail]/{yourUsername}/SYNERGxDB/.git
cd SYNERGxDB

• Create .env using .env.example as a reference to access the database

• Install all server dependencies npm i

• Start the server by running npm start or npm run devstart(development mode) command

• Install all client dependencies cd client && npm i

• Start the client (development mode) by running npm start

• Open http://localhost:3000 to view it in the browser.

Build Instructions

• Go into clients directory cd client

• To build React app for production use npm run build command

Dependencies

• React
• Styled-Components
• Styled-Normalize
• Plotly.js
• React-Dom
• React-Router
• React-plotly.js
• React-window
• Express
• Knex
• Dotenv
• Body-parser

Dev Dependenices

• Nodemon
• Eslint

Servers

• Production server: http://SYNERGxDB.ca/

Database

A MySQL dump of pharmacological and molecular profiles of SYNERGxDB is available on Zenodo.