Christian F. Baumgartner's repositories
PHiSeg-code
Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019
acdc_segmenter
Public code for our submission to the 2017 ACDC Cardiac Segmentation challenge
vagan-code
Tensorflow implementation of 'Visual Feature Attribution using Wasserstein GANs'
tue-slurm-helloworld
Instructions and examples to deploy some PyTorch code on slurm using a Singularity Container
SonoNet-weights
Model descriptions and weights for all the variations of the SonoNet for real-time fetal standard scan plane detection.
image-sorter
Small project for sorting images in a folder into a number of label categories which can be specified by the user.
ShoreditchBoulderTopo
Topo for the Boulder in Shoreditch Park
artistic-style-transfer
Implementation of the artistic style transfer paper by Gatys et al. using the Lasagne framework.
baumgach.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
scribble_annotator
Basil's MATLAB GUI to read in niifti/HDF5 files and create weak supervision annotations (scribbles)
BackgroundGenerator
Simple class for preprocessing minibatches in a separate background thread
basil_scribble_supervision
Basil's internship work on scribble supervision
chaksu-classifier
A ResNet for classifying Chaksu into glaucoma suspect and not glaucoma suspect
Chexpert
Top 1 solution of Chexpert
l2l-example
This is an example for how to prepare a valid submission for the MICCAI L2L Challenge
midl-openreview-scripts
A number of scripts to access papers and reviews through the Openreview Python API
ralis
Code for the paper "Reinforced Active Learning for Image Segmentation"
scribble_segmentation
Yigit's DLMIA scribble segmentation code
tue-slurm
Utility for working with Uni Tübingen Slurm Cluster
Visual-Feature-Attribution-Using-Wasserstein-GANs-Pytorch
Implementation of Visual Feature Attribution using Wasserstein GANs (VAGANs, https://arxiv.org/abs/1711.08998) in PyTorch