barslmn's starred repositories

somalier

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Language:NimLicense:MITStargazers:254Issues:0Issues:0

hyperdx

Resolve production issues, fast. An open source observability platform unifying session replays, logs, metrics, traces and errors powered by Clickhouse and OpenTelemetry.

Language:TypeScriptLicense:MITStargazers:6316Issues:0Issues:0

papers_with_data_to_mine

published papers with a lot of data

Stargazers:61Issues:0Issues:0

sioyek

Sioyek is a PDF viewer with a focus on textbooks and research papers

Language:CLicense:GPL-3.0Stargazers:6704Issues:0Issues:0

awesome-selfhosted

A list of Free Software network services and web applications which can be hosted on your own servers

License:NOASSERTIONStargazers:183053Issues:0Issues:0

score

Tools to work with GWAS-VCF summary statistics files

Language:CLicense:MITStargazers:91Issues:0Issues:0

TwoSampleMR

R package for performing 2-sample MR using MR-Base database

Language:RLicense:NOASSERTIONStargazers:382Issues:0Issues:0

igv-reports

Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

Language:PythonLicense:MITStargazers:327Issues:0Issues:0

quickdraw-dataset

Documentation on how to access and use the Quick, Draw! Dataset.

License:NOASSERTIONStargazers:6006Issues:0Issues:0

pets

A configuration management system for Pets, not Cattle

Language:GoLicense:MITStargazers:459Issues:0Issues:0

jq-zsh-plugin

jq zsh plugin

Language:ShellLicense:MITStargazers:304Issues:0Issues:0

bioSyntax

Syntax highlighting for computational biology

Language:ShellLicense:GPL-3.0Stargazers:250Issues:0Issues:0

tabular

Vim script for text filtering and alignment

Language:Vim scriptLicense:NOASSERTIONStargazers:2555Issues:0Issues:0

zotero-better-bibtex

Make Zotero effective for us LaTeX holdouts

Language:TypeScriptLicense:MITStargazers:4946Issues:0Issues:0

st-ligatures

Patches for ST (suckless terminal) that add support for ligatures drawing

Stargazers:53Issues:0Issues:0

alife

Self-replicating, mutating Python code.

Language:PythonStargazers:3Issues:0Issues:0

highlight-pointer

Highlight mouse pointer/cursor using a dot - useful for presentations, screen sharing, ...

Language:CLicense:MITStargazers:127Issues:0Issues:0

CHM13

The complete sequence of a human genome

License:NOASSERTIONStargazers:875Issues:0Issues:0

rtw89

Driver for Realtek 8852AE, an 802.11ax device

Language:CLicense:GPL-2.0Stargazers:1190Issues:0Issues:0

latex-cookbook

A comprehensive LaTeX template with examples for theses, books and more, employing the 'latest and greatest' (UTF8, glossaries, fonts, ...). The PDF artifact is built using CI/CD, with a Python testing framework.

Language:TeXLicense:MITStargazers:206Issues:0Issues:0

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

Language:TypeScriptStargazers:768Issues:0Issues:0

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

Stargazers:2953Issues:0Issues:0
Language:Jupyter NotebookStargazers:56Issues:0Issues:0

Nebula

Desktop setup

Language:ShellLicense:CC0-1.0Stargazers:549Issues:0Issues:0

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

Language:PythonLicense:MITStargazers:232Issues:0Issues:0

django-organizations

:couple: Multi-user accounts for Django projects

Language:PythonLicense:BSD-2-ClauseStargazers:1249Issues:0Issues:0

pedigreejs

A web tool for building pedigrees, https://ccge-boadicea.github.io/pedigreejs/

Language:JavaScriptLicense:GPL-3.0Stargazers:57Issues:0Issues:0

django-tinymce

TinyMCE integration for Django

Language:JavaScriptLicense:MITStargazers:1249Issues:0Issues:0

django-tex

A simple Django app to render LaTeX templates and compile them into PDF files.

Language:PythonLicense:MITStargazers:79Issues:0Issues:0