barslmn's repositories
barsite
personal website
bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
bioscripts
Collection of tiny scripts for various bioinformatics stuff
ceph-dnm-manuscript
Code used for figure generation and statistical analysis for https://elifesciences.org/articles/46922
cross-symbol-checker
Cross check RefSeq and Ensembl annotation sources for HGNC Symbols
dove
DOwnstream Vcf Evaluation
st
suckless simple terminal fork
chords
helper for finding chords
ClassifyCNV
ClassifyCNV: a tool for clinical annotation of copy-number variants
dotfiles
dotfiles
hgnc-data
hgnc data archive from their ftp
linkageplot
plot result of easy linkage
org-roam-ui
A graphical frontend for exploring your org-roam Zettelkasten
picus
Pointed Interpretation of Clinical Variant Significance
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
sci-pub
Federated scientific paper publishing framework
seqr
web-based analysis tool for rare disease genomics
seqr-loading-pipelines
hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
seqr-reporting
Reporting module for seqr
sn
simple note taking with dmenu and cron reminders.
vcf2tsv
Awk script for parsing vcf
vesta
tool for pedigree