atongsa's repositories
AI-Expert-Roadmap
Roadmap to becoming an Artificial Intelligence Expert in 2020
applied_population_genetics
A textbook on population genetics
at_cafe_visual
visual_cafe
biocode
Bioinformatics code libraries and scripts
common_analyses
Repository of common bioinformatics scripts
common_scripts
my bin directory
eems-around-the-world
Repo to analyze population genetic data with many different methods
genomics-analysis-pipeline
Some useful bioinformatics pipelines for genomics analysis
gffread
GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
google-access-helper
谷歌访问助手破解版、谷歌翻墙、谷歌梯子、谷歌梯子扩展工具、谷歌商店访问、Chrome翻墙
graph-genomics-review
Pangenome graphs (review article on graph-based pangenomic methods)
GWAS_script
Working on cotton resequencing
opioiddeaths
This repository is for a research project that is systematically analyse coroners’ reports (called prevent future deaths or PFDs) in which an opioid was implicated in a death, and the responses to them.
orthomcl_tools
A couple of tools I find indispensable for post orthomcl down-stream analysis.
phytophthora_fragariae
Commands used in the analysis of P. fragariae genomes
popgen-notes
Population genetics notes
SHO_analysis_2020
R scripts for running downstream analysis of resequencing data
smcpp_input
small scripts to prepare smcpp files
svm-r-markdown-templates
I have a suite of R Markdown templates for academic manuscripts, beamer presentations, and syllabi. I share them here.