Haopeng Yu's starred repositories
cas-analyzer
Full JavaScript-based assessment tool for targeted sequencing data of genome-edited samples.
jstraining
全栈工程师培训材料
atlasbioinfo.github.io
Personal home page
SOAP3-dp
To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously.
deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
StructureFold2
StructureFold2
diff_BUM_HMM
Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, based on an extension of the BUM-HMM method.
RNAStructViz
Visualization, comparison, and analysis of RNA secondary structures via a cross-platform GUI
hackingtool
ALL IN ONE Hacking Tool For Hackers
photonix
A modern, web-based photo management server. Run it on your home server and it will let you find the right photo from your collection on any device. Smart filtering is made possible by object recognition, face recognition, location awareness, color analysis and other ML algorithms.
RNAFramework
RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
nndl.github.io
《神经网络与深度学习》 邱锡鹏著 Neural Network and Deep Learning
RagonInst_Sept2017_Workshop
Trinity rna-seq workshop at the Ragon Institute, Sept. 2017
TransDecoder
TransDecoder source
trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
pure-bash-bible
📖 A collection of pure bash alternatives to external processes.