Giters
arundurvasula
/
angsd-wrapper
A project for extending ANGSD
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Stargazers:
8
Watchers:
11
Issues:
87
Forks:
12
arundurvasula/angsd-wrapper Issues
Inbreeding values using NgsAdmix
Closed
6 years ago
Comments count
1
question about message: key already exists
Closed
9 years ago
Comments count
3
depre
Closed
9 years ago
Comments count
1
fst bp?
Closed
9 years ago
"Upstream Work" in Wiki
Closed
9 years ago
Comments count
1
Errors when working through tutorial
Closed
9 years ago
Comments count
8
shiny thetas issue
Updated
9 years ago
shiny thetas and SFS graphing issues
Closed
9 years ago
Comments count
3
description of expected out files
Updated
9 years ago
Comments count
6
No PCA.conf
Closed
9 years ago
Comments count
1
common variables
Closed
9 years ago
Comments count
2
ZengE and Fu and Li's D have weird plots
Updated
9 years ago
Comments count
2
fst subsetting in shiny
Updated
9 years ago
add reference fasta sort fix
Closed
9 years ago
Comments count
2
script to install dependencies
Closed
9 years ago
Comments count
2
Configuration confusing and limiting
Closed
9 years ago
Comments count
5
sfs has problems with doGlf and doGeno
Closed
9 years ago
echo stuff
Closed
9 years ago
Comments count
3
option to add filename extensions
Closed
9 years ago
Comments count
2
Spinny wheel
Closed
9 years ago
Comments count
1
Add SGE/slurm scripts, add automagic cluster submission
Closed
9 years ago
Comments count
1
intelligent crashes
Updated
9 years ago
Comments count
1
stuff we want
Closed
9 years ago
Comments count
6
readme update
Closed
9 years ago
Comments count
2
file names
Closed
9 years ago
Comments count
3
Have you considered Pacbio?
Closed
9 years ago
Header Requirements
Closed
9 years ago
Comments count
1
SNP call w/ANGSD
Closed
9 years ago
Comments count
1
Extra classes in the SFS
Closed
9 years ago
GFF in zoomed plot
Closed
9 years ago
Comments count
3
Add intersect to Fst output
Closed
9 years ago
Comments count
1
Fst base pairs
Closed
9 years ago
Comments count
2
Automate creation of config files for multiple regions
Closed
9 years ago
Comments count
1
Add a license
Closed
9 years ago
Comments count
1
Thetas: ability to remove windows where nSites < x
Closed
9 years ago
Comments count
1
check all scripts for file_exists
Closed
9 years ago
Comments count
2
ABBA easter egg
Closed
9 years ago
automatic generation of inbreeding coeff. file
Closed
9 years ago
Comments count
4
ngsF directory missing
Closed
9 years ago
Comments count
2
should common.conf be sourced in the scripts?
Closed
10 years ago
Comments count
3
Add NSITES calculation to Fst
Closed
10 years ago
genotype likelihoods and ngsF
Closed
10 years ago
Papers
Closed
10 years ago
Comments count
3
shiny loads example file on error
Updated
10 years ago
in common.conf, there shouldn't be a scripts/data folder
Closed
10 years ago
lowess on plots
Closed
10 years ago
Thetas
Closed
10 years ago
document defaults
Closed
10 years ago
Comments count
1
makefile
Closed
10 years ago
Comments count
1
Plotting pretty
Closed
10 years ago
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