Antônio Camargo's repositories
prodigal-gv
A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes
2022-pths-rna-seq-analysis
RNA-Seq analysis for "Transcription Factor 4 loss-of-function is associated with deficits in progenitor proliferation and cortical neuron content"
bioinformatics-snakemake-pipelines
Collection of Snakemake pipeline for commin bioinformatics tasks
genomad-annotate-module-snakemake
A snakemake workflow implementing the genomad annotate module steps
prodigal-sc
Prodigal Gene Prediction Software
pyrodigal-gv
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.
tspex-webapp
tspex webapp
cobra.github.io
A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.
docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
genbank-submission-cleaner
Remove contaminants flagged during GenBank's submission process
Gradient-Centralization-TensorFlow
Instantly improve your training performance of TensorFlow models with just 2 lines of code!
hmmsearch-parser-dbCAN
hmmsearch parser for the dbCAN database
homebrew-core
🍻 Default formulae for the missing package manager for macOS
icons
Named, vector icons for elementary OS
localcolabfold
ColabFold on your local PC
PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
rich-click
Format click help output nicely with rich.
rnasamba-webapp
RNAsamba webapp